HullRad

HullRad


Synopsis

Algorithm for calculating hydrodynamic properties of a macro-molecule from a structure file

Description

HullRad is an algorithm for calculating hydrodynamic properties of a macro-molcule from a structure file. It uses a convex hull model to estimate the hydrodynamic volume of a macro-molecule.

HullRad provides:

  • Molecular Mass of the protein (g/mol)
  • Partial Specific Volume (mL/g) 
  • Anhydrous Volume Sphere Radius (Angstrom)
  • Anhydrous Radius of Gyration (Angstrom) (Note: Compare to SANS, not SAXS)
  • Maximum Dimension (Angstrom)
  • Axial Ratio (a/b)
  • Frictional Ratio (f/f0)
  • Translational Diffusion Coefficient (cm2/s)
  • Translational Hydrodynamic Radius (Angstrom)
  • Sedimentation Coefficient (sec)
  • Intrinsic Viscosity (cm3/g)
  • Rotational Diffusion Coefficient (s-1)
  • Rotational Hydrodynamic Radius (Angstrom)


URL

http://52.14.70.9/index.html

Versions

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